No problem The Mcafee stinger might work as well tho remember you need to redownload it as it does not update itself.
Just for future googlers to note
I rebooted the server last night and ran another scan with Malware Bytes to confirm everything has worked. The scan turned up no results and the user is no longer having issues I can confirm that Malware Bytes will remove this Malware and is safe to use on a production server.
As for Stinger is it known to be compatible with Windows Server 2003? As the machine I am trying to remove the virus from is a production server in constant use.
Sorry will ask but I assume not