What? No one has any suggestions?
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You can import the list of repositories defined on the old server to the new server as stated in the guide. The content of the master repository on the old server is signed by using the repository key of that server and this same content is replicated to the DRs. So if the target server does not have the repository key from the old server, you will have to do a full replication to all the repositories from the new server (which will be using the repo key of the new server ofcourse).
If you want to avoid replicating again, simply export the master repository key from the old server (not to be confused with the agent server communication master key) and import it to the new server in addition to the sitemgr.xml. Hope that helps.