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Recommended Linux ignore list?

Is there a recommended Linux ignore list for doing nightly scans with VSEL 1.7?  We're now deploying the software to our first Linux server and had it run a nightly scan last night and got back 1200+ "threats" that were all "File I/O errors" related to the VSEL trying to scan system files like items in /sys/devices & /sys/kernel which will be easy to have it ignore those 2 locations.  However are there other locations or a better practice of places to scan/not scan?

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