as far as I can tell, there is no problem emerging out of this behaviour. The only problem we were confronted with were 4 Notebooks out of 350 which crashed after the update (creating a new PBFS did the trick well) but there is no coherence to the mentioned question of yours.
Create just one task and add both installs into the one task - Make sure the agent install appears first in the list then click the + button to add the install for EEPC. That way it will deploy the agent first and then EEPC.
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